Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015856865.1_cds_XP_016513279.1_25836
CDS Infomation

[gene=LOC107830278] [db_xref=GeneID:107830278] [protein=importin subunit alpha-2-like] [protein_id=XP_016513279.1] [location=join(13596..13805,14384..14480,14584..14675,14772..14903,15049..15234,16440..16603,16724..16802,17825..17953,18124..18251,18342..18711)] [gbkey=CDS]
Sequence

ATGTCGCTGAGACCGAGTGCGAGGACGGAGGTTCGTCGGAACCGGTATAAGGTAGCCGTG
GATGCGGAGGAAGGAAGGCGTAGGAGAGAGGATAACATGGTTGAGATTCGTAAGAATAGG
AGAGAGGAAAGCTTGCAGAAGAAGCGACGTGAAGGTCTTCAGCCGGATCAGCTACATAAT
GTTCCTGTTCAGACAGCCTCTGGCGAAAAGTTAGAGATGATACCACAATTGGTTGCAGGT
GTTTGGGGCGAAGATGGCAATGTACAGCTTGAGGCTACTTCTTATTTCAGAAAAATGCTC
TCAATCGAAAGGAGTCCCCCAATAGCGGAAGTAATTCAAGCTGGTGTAGTTCCTCGTTTT
GTTCAATTTCTAATGAGAGATGACTTTCCACAGCTTCAGTTTGAGGCAGCTTGGGCTCTC
ACAAATATTGCATCTGGAACATCTGAGCATACAAAGGTGGTAATTGATTCTGGTGCAGTC
CCAAGTTTTGTGAAACTTCTTGGTTCTCCTAGCGATGATGTCCGAGAGCAGGCTGTGTGG
GCTCTAGGAAATGTTGCTGGTGATTCACCAAAATGCCGTGATCTAGTCCTTAGCTGTGGT
GCTTTGGCTCCCTTGTTGGCCCAATTTAACCCAAATGCCAAGCTATCTATGCTGAGAAAT
GCCACTTGGACACTTTCAAATTTCTGTAGAGGGAAGCCACAACCTTCTTTTGATCAGACA
AGGCCTGCTCTTCCAGCTCTTCAACAGCTAATACATTCGACCGATGAAGAAGTTTTAACT
GATGCATGCTGGGCACTCTCATATCTTTCCGATGGTACAAATGATAAAATTCAAGCTGTT
ATTGATTCTGGAGTATGTCCCCGACTGGTTGAGTTGTTAGGTCATCCTTCTCCATCGGTG
CTGATTCCTGCTCTAAGGACAGTTGGAAATATTGTCACCGGAGATGATATGCAAACTCAG
TGTATCATCAATCATCAGGCTTTGCCCTGTCTCTTGGTCTTGTTGAATGGTAATCACAAG
AAAAGTATAAAGAAGGAAGCTTGTTGGACAATTTCAAACATTACAGCTGGCAACAAGGAG
CAAATTCAGTGTGTAATTGAGGCTGGTGTTTTTGGTCCTCTTGTTAATTTGCTTCAAAAT
GCGGAGTTTGAGATTAAAAAAGAGGCTGCATGGGCAATCTCCAATGCCACATCTGGTGGT
ACTAATGAACAGATCAAATACCTTGTAAGTCAAGGTTGTATCAAACCACTCTGTGATCTC
CTAGTTTGTCCTGACCCGAGGATTGTCACAGTTTGTCTTGAAGGGCTTGAAAATATTTTG
AAGGTTGGCGATGTTGAGAATTTGGGTGAGGCAGGAAATATAAACGTGTATGCTCAAATG
ATTGATGATGCAGACGGTATAGAAAAAATAGAGAATCTTCAAAGTCATGACAATCAAGAG
ATTTATGAAAAGGCTGTGAAGATTCTTGAGACATACTGGTTGGAAGAAGATGATGAGACC
ATGCCACCTGGTGATGCGACCCACCAGGGTTTCCAGTTTGGAGGTGGGAATGTCTCTGTA
CCATCAGGTGGATTCAACTTCAACTGA

Peptide Sequence

PEP ID

XP_016513279.1
PEP Infomation

PREDICTED: importin subunit alpha-2-like [Nicotiana tabacum]
Sequence

MSLRPSARTEVRRNRYKVAVDAEEGRRRREDNMVEIRKNRREESLQKKRREGLQPDQLHN
VPVQTASGEKLEMIPQLVAGVWGEDGNVQLEATSYFRKMLSIERSPPIAEVIQAGVVPRF
VQFLMRDDFPQLQFEAAWALTNIASGTSEHTKVVIDSGAVPSFVKLLGSPSDDVREQAVW
ALGNVAGDSPKCRDLVLSCGALAPLLAQFNPNAKLSMLRNATWTLSNFCRGKPQPSFDQT
RPALPALQQLIHSTDEEVLTDACWALSYLSDGTNDKIQAVIDSGVCPRLVELLGHPSPSV
LIPALRTVGNIVTGDDMQTQCIINHQALPCLLVLLNGNHKKSIKKEACWTISNITAGNKE
QIQCVIEAGVFGPLVNLLQNAEFEIKKEAAWAISNATSGGTNEQIKYLVSQGCIKPLCDL
LVCPDPRIVTVCLEGLENILKVGDVENLGEAGNINVYAQMIDDADGIEKIENLQSHDNQE
IYEKAVKILETYWLEEDDETMPPGDATHQGFQFGGGNVSVPSGGFNFN

Transcript Sequence

Gene sequence data has not been registered.